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Evaluating deep learning for predicting epigenomic profiles
In this post I will briefly introduce GOPHER – GenOmic Profile-model compreHensive EvaluatoR (yes, anything can be used in an abbreviation). I together with a class/labmate – Amber and my PI worked on developing this framework for analysing which training strategies to use for sequence-to-function deep learning models in epigenetics. We conducted a systematic analysis…